public class Owczarzy11TandemLockedAcid extends LockedAcidNNMethod implements NamedMethod
| Modifier and Type | Field and Description |
|---|---|
static java.lang.String |
defaultFileName
String defaultFileName : default name for the xml file containing the thermodynamic parameters for locked nucleic acid
|
collector, fileName| Constructor and Description |
|---|
Owczarzy11TandemLockedAcid() |
| Modifier and Type | Method and Description |
|---|---|
java.lang.String |
getName()
Gets the full name of the method.
|
void |
initialiseFileName(java.lang.String methodName)
If a file name is entered by the user, the file name of the model becomes the file name entered by the user,
otherwise the default file name of the model is used.
|
void |
loadData(java.util.HashMap<java.lang.String,java.lang.String> options)
To load the necessary thermodynamic parameters of the implemented class.
|
computeThermodynamics, isApplicable, isMissingParametersgetCollector, getData, getDataFileName, loadFilepublic static java.lang.String defaultFileName
public void initialiseFileName(java.lang.String methodName)
PatternComputationMethodinitialiseFileName in interface PatternComputationMethodinitialiseFileName in class PatternComputationmethodName - : method or model name entered by the user.public void loadData(java.util.HashMap<java.lang.String,java.lang.String> options)
PatternComputationMethodloadData in interface PatternComputationMethodloadData in class PatternComputationoptions - which contains the current options. (default options and options entered by the user)public java.lang.String getName()
getName in interface NamedMethodgetName in class LockedAcidNNMethod